 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.TU.contig_29561.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
NAC |
| Protein Properties |
Length: 248aa MW: 28476.7 Da PI: 4.5974 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.TU.contig_29561.1 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 175.5 | 1.5e-54 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
lppGfrFhPtdeelv++yLk+k++g ++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+t
evm.TU.contig_29561.1 6 LPPGFRFHPTDEELVNYYLKRKINGLEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKST 92
79****************************.99**************84335556888****************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gkd++v+s +++ +g+kktLv+y+grap+g +tdWvmheyrl
evm.TU.contig_29561.1 93 GKDRRVTS-QNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133
********.999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MAPVGLPPGF RFHPTDEELV NYYLKRKING LEIELDIIPE VDLYKCEPWE LAEKSFLPSR 60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS QNRPIGMKKT LVYYRGRAPQ 120
GIRTDWVMHE YRLDDKDCED TSGIQDSYAL CRVFKKNGIC SDTEDQQQAQ CSLLMMDSPQ 180
GVINNNNNSN IEYETTSPDV PIASSSYIDE DDKDDSWMQF ITDDAWCSSS TGLMGVEEVS 240
QHVAFTN*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-54 | 1 | 157 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-54 | 1 | 157 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-54 | 1 | 157 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-54 | 1 | 157 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 3e-54 | 1 | 157 | 12 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 3e-54 | 1 | 157 | 12 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
