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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
e_gw1.20.00.75.1 |
Common Name | OT_ostta20g00060 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Family |
HSF |
Protein Properties |
Length: 86aa MW: 10246.4 Da PI: 8.4812 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
e_gw1.20.00.75.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 88.2 | 1.1e-27 | 1 | 86 | 5 | 99 |
HHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXX CS
HSF_DNA-bind 5 klyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikr 99
k+++++ de+ +++i w+eng++f v++++ ++++ Lpk+FkhsnfaSFvRQLn YgF+k ++++ eF + F++g+ ell+++kr
e_gw1.20.00.75.1 1 KTWNLVTDEQSNDVIAWNENGRTFTVWKPDVLESEYLPKTFKHSNFASFVRQLNNYGFRKCHSDR---------YEFGVEGFERGRPELLTTLKR 86
89************************************************************999.........78**************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009408 | Biological Process | response to heat |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5d8k_B | 2e-18 | 1 | 86 | 8 | 104 | Heat shock factor protein 2 |
5d8l_B | 2e-18 | 1 | 86 | 8 | 104 | Heat shock factor protein 2 |
5d8l_D | 2e-18 | 1 | 86 | 8 | 104 | Heat shock factor protein 2 |
5d8l_F | 2e-18 | 1 | 86 | 8 | 104 | Heat shock factor protein 2 |
5d8l_H | 2e-18 | 1 | 86 | 8 | 104 | Heat shock factor protein 2 |
5hdk_A | 2e-18 | 1 | 86 | 13 | 109 | Heat shock factor protein 2 |
5hdk_B | 2e-18 | 1 | 86 | 13 | 109 | Heat shock factor protein 2 |
5hdk_C | 2e-18 | 1 | 86 | 13 | 109 | Heat shock factor protein 2 |
5hdk_D | 2e-18 | 1 | 86 | 13 | 109 | Heat shock factor protein 2 |
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Functional Description ? help
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Source |
Description |
UniProt | DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. |