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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
cra_locus_9524_iso_1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family |
NAC |
Protein Properties |
Length: 347aa MW: 39522.2 Da PI: 6.9173 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
cra_locus_9524_iso_1 | genome | MPGR | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.3 | 3.6e-50 | 20 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrk 74
lp+GfrFhP+deel+v+yL kk+++ +l++ ++++ev++yk++PwdLpkk++ +++ewyfF++rd+ky++g r+
cra_locus_9524_iso_1_len_1146_ver_3 20 LPAGFRFHPSDEELIVHYLGKKANKFPLPA-SIVAEVELYKFNPWDLPKKCSFGDEEWYFFTPRDRKYPNGMRP 92
799***************************.88***************99999********************* PP
NAM 75 nratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
nr++ sgyWkatg dk+++++ +++++g+kk Lvfy+g+ pkg+ktdW+mheyrl
cra_locus_9524_iso_1_len_1146_ver_3 93 NRMAGSGYWKATGIDKPIVAScGSKVIGVKKALVFYTGKPPKGNKTDWTMHEYRL 147
*******************9988899***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
XGRGMNSMEK NPKSEIIFQL PAGFRFHPSD EELIVHYLGK KANKFPLPAS IVAEVELYKF 60 NPWDLPKKCS FGDEEWYFFT PRDRKYPNGM RPNRMAGSGY WKATGIDKPI VASCGSKVIG 120 VKKALVFYTG KPPKGNKTDW TMHEYRLPEP AAPAADSSWT TSTTKQNSMR LDEWVLCRVR 180 QKTGMNFGNF GEERNGLNNN NNNNKTVQKP QKTANYSTFE IVKDYDDLYY KEYGPMLPFL 240 FNDNSSSQDL ASTDQTTISF EGKNVKDSSS SSVCEDNFNI GIGIVNGKRK MFEDQDNIIS 300 HKKLAYQKEM ENDDDELLPI TPSSNNNNID QLCSSMMYQE LYTLAFT
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