 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
cra_locus_94_iso_6 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
MYB |
| Protein Properties |
Length: 394aa MW: 43421.2 Da PI: 9.4291 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_94_iso_6 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 63.1 | 5.7e-20 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEdell ++v+++G+++W++I++ ++ gR++k+c++rw +
cra_locus_94_iso_6_len_1568_ver_3 14 KGPWSPEEDELLQQLVQKHGPRNWSLISKSIQ-GRSGKSCRLRWCNQ 59
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 68 | 110 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++
cra_locus_94_iso_6_len_1568_ver_3 68 AFTPEEDETIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 110
79******************.*********.***********986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0046686 | Biological Process | response to cadmium ion |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MSSNSMRKDV DRIKGPWSPE EDELLQQLVQ KHGPRNWSLI SKSIQGRSGK SCRLRWCNQL 60
SPQVEHRAFT PEEDETIIRA HARFGNKWAT IARLLSGRTD NAIKNHWNST LKRKCSSMSG 120
DEEGNDYSND LIQHQQPLKR SVSAGSAGPV SGGLYLSPGS PSGSDVSDSS LPNMSSSQLF 180
KPVARTGSVL PPQLETTTSS TNNNDDPPTS LSLSLPGIDP TESINRTNEL TQPKNPIQLL 240
PPSPPPSPPS APAPSPSLIQ QVSINPVAIP PQKAPIVPTA PVVVVQTPPV VAQQQDKVFV 300
PFSAELLAVM QEMIKKEVWS YMNMMGMERQ QQQQQQQRYL VQQHQQHVQQ QQQQMMMMHN 360
GMGMGMGMGM MQASAANDGF RNNAIKRIGI NKIE
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
