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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
cra_locus_9426_iso_4 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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| Family |
HB-other |
| Protein Properties |
Length: 75aa MW: 8347.39 Da PI: 7.7043 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_9426_iso_4 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 23.1 | 1.3e-07 | 3 | 33 | 25 | 55 |
--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 25 psaeereeLAkklgLterqVkvWFqNrRake 55
++++e+ +L++ +gL++rq+ +WF N+R ++
cra_locus_9426_iso_4_len_569_ver_3 3 LQEDEKNKLSEITGLDQRQINNWFINQRKRH 33
578999**********************985 PP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in shoot formation during embryogenesis. {ECO:0000269|PubMed:10080693}. |
| UniProt | Probable transcription factor that may be involved in shoot formation during embryogenesis. {ECO:0000269|PubMed:10080693, ECO:0000269|PubMed:10488233}. |
| Publications
? help Back to Top |
- Ito Y,Eiguchi M,Kurata N
KNOX homeobox genes are sufficient in maintaining cultured cells in an undifferentiated state in rice.
Genesis, 2001. 30(4): p. 231-8
[PMID:11536429] - Postma-Haarsma AD, et al.
Developmental regulation and downstream effects of the knox class homeobox genes Oskn2 and Oskn3 from rice.
Plant Mol. Biol., 2002. 48(4): p. 423-41
[PMID:11908517] - Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Kuijt SJ, et al.
Different subcellular localization and trafficking properties of KNOX class 1 homeodomain proteins from rice.
Plant Mol. Biol., 2004. 55(6): p. 781-96
[PMID:15604716] - Cheng CH, et al.
A fine physical map of the rice chromosome 5.
Mol. Genet. Genomics, 2005. 274(4): p. 337-45
[PMID:16261349] - Chu H, et al.
A CLE-WOX signalling module regulates root meristem maintenance and vascular tissue development in rice.
J. Exp. Bot., 2013. 64(17): p. 5359-69
[PMID:24043854] - Kuijt SJ, et al.
Interaction between the GROWTH-REGULATING FACTOR and KNOTTED1-LIKE HOMEOBOX families of transcription factors.
Plant Physiol., 2014. 164(4): p. 1952-66
[PMID:24532604] - Coudert Y, et al.
Identification of CROWN ROOTLESS1-regulated genes in rice reveals specific and conserved elements of postembryonic root formation.
New Phytol., 2015. 206(1): p. 243-54
[PMID:25442012] - Xu Y, et al.
OsARID3, an AT-rich Interaction Domain-containing protein, is required for shoot meristem development in rice.
Plant J., 2015. 83(5): p. 806-17
[PMID:26121094] - Kir G, et al.
RNA Interference Knockdown of BRASSINOSTEROID INSENSITIVE1 in Maize Reveals Novel Functions for Brassinosteroid Signaling in Controlling Plant Architecture.
Plant Physiol., 2015. 169(1): p. 826-39
[PMID:26162429]
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