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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_9351_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | EIL | ||||||||
Protein Properties | Length: 279aa MW: 31791.1 Da PI: 4.5036 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 54.3 | 3.8e-17 | 2 | 114 | 214 | 353 |
HHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 214 ikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkk 288 ikhm+p++++ir+l+ qsk lqd+m+a++s+++++v+nqee++ + +++v++s + +++ eg++ cra_locus_9351_iso_1_len_922_ver_3 2 IKHMAPDFNRIRRLVKQSKILQDRMTARDSATWSKVINQEESLS--------Q--LAQRSVKISPSMEDEEEGTR 66 9***************************************9854........2..25667888888776666555 PP XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 289 eskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 s +krk s+ ++++ cq+ +++s+++ +f+dkns+ q+e cra_locus_9351_iso_1_len_922_ver_3 67 ISG---------------SEKRKC-MFVSEVIEDH-SLFACQNFMCPQSDVASGFEDKNSRIQHE 114 555...............456663.3334444444.579**********************9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 5.1E-16 | 2 | 48 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Pfam | PF04873 | 4.7E-11 | 2 | 42 | No hit | No description |
SuperFamily | SSF116768 | 1.09E-13 | 2 | 44 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence Send to blast |
XIKHMAPDFN RIRRLVKQSK ILQDRMTARD SATWSKVINQ EESLSQLAQR SVKISPSMED 60 EEEGTRISGS EKRKCMFVSE VIEDHSLFAC QNFMCPQSDV ASGFEDKNSR IQHEKTCAYR 120 PNNVDHFDAN YVTTMDLPMY ESMVITNEKL PQSDHWMDIS EDSNEANIAE IVQEINRILD 180 IPPYDHLFPA TPDCMDSEDT INHEANITQV LQEVNGNLEN YRNCCGGAYV FRNQLRLDPT 240 SGNRTNLNLN VSPLEEALGV GHENAPSAWD LAYFHQGDP |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |