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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
cra_locus_8413_iso_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
FAR1 |
| Protein Properties |
Length: 209aa MW: 24183.3 Da PI: 9.9943 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_8413_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 93.6 | 2.5e-29 | 43 | 130 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgk 75
fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gk
cra_locus_8413_iso_1_len_1854_ver_3 43 FYNAYATKVGFVIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGK 114
******************************************9988..9************************* PP
FAR1 76 wevtkleleHnHelap 91
w+vtk+++eH+H+l+p
cra_locus_8413_iso_1_len_1854_ver_3 115 WVVTKFVKEHTHPLTP 130
*************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
IDEDLSRTQI VPLEEPQTVN NSASNDEPYV GQEFESEAAA HAFYNAYATK VGFVIRVSKL 60
SRSRRDGSAI GRALVCNKEG FRMPDKREKI VRQRAETRVG CRAMILVRKV SSGKWVVTKF 120
VKEHTHPLTP GKGRKDLIYD QYPNEHDKIR ELTQQLAVEK KRAATYKRHL EMIFEHIEEH 180
NQSLSKKIQN IVNNVREMES KELQSRRXC
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
