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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
cra_locus_8404_iso_2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family |
bZIP |
Protein Properties |
Length: 393aa MW: 43059.6 Da PI: 6.5831 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
cra_locus_8404_iso_2 | genome | MPGR | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.4 | 4.3e-10 | 190 | 246 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l + l s
cra_locus_8404_iso_2_len_1629_ver_3 190 KRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSS 246
9****************************************9998877666655555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 393 aa
Download sequence Send
to blast |
LKHFFIRFSS DSGIAVLRIY WEIQFPIRKE EMQDPNGKQQ AASFALRPSH HRRAHSEVNF 60 RLPEDLDLVS DPFDAPVGSS FEELGSEDDL FSTYMDIEKL GGSNSNSNVN EGVSSDNAGG 120 GAAGGGSGGI GRGSDGEKSL TATTPMGGRP RHRYSNSMDS SGLLLGESSI EAKKAMAPDK 180 LAELWTIDPK RAKRILANRQ SAARSKERKA RYISELERKV QTLQTEATTL SAQLTLFQRD 240 TTGLSSENTE LKLRLQAMEQ QAQLRDALNE ALKQEVERLR IATGEMASPS DAYNLGMQHV 300 PYNQSAFFAH QHQSGANDSP NTRMPQYNNL QQPGMPNHHH QMLSANHVQG FSDAMQQDPL 360 GRFQGLDIGS SRGSHLGKPE GPSISASESS STF
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Functional Description ? help
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Source |
Description |
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins. J. Exp. Bot., 2016. 67(19): p. 5699-5710 [PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7 [PMID:9356517]
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