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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
cra_locus_8079_iso_1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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| Family |
G2-like |
| Protein Properties |
Length: 188aa MW: 19976.2 Da PI: 10.624 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_8079_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.6 | 5e-32 | 24 | 79 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rF+ a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
cra_locus_8079_iso_1_len_881_ver_3 24 KTRRCWSPELHKRFLMALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 79
68****************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
GGGGGGGGGN KKDEKEKETQ SARKTRRCWS PELHKRFLMA LQQLGGSHVA TPKQIRELMK 60
VDGLTNDEVK SHLQKYRLHN RRPSSSIHNN NNNPQAPQFV VVGGIWVPPP VEYAAMATTT 120
GSGGEASGGA NSNGIYAPIA TLPSPPPPQV ANKQRQQHHK QPRSCHRGSH SGGGASSSTD 180
TTTASPSY
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 3e-14 | 24 | 77 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-14 | 24 | 77 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-14 | 24 | 77 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-14 | 24 | 77 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-14 | 24 | 77 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
| UniProt | Transcriptional repressor that may play a role in response to nitrogen. May be involved in a time-dependent signaling for transcriptional regulation of nitrate-responsive genes. Binds specifically to the DNA sequence motif 5'-GAATC-3' or 5'-GAATATTC-3'. Represses the activity of its own promoter trough binding to these motifs. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by nitrate. {ECO:0000269|PubMed:23324170}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Sawaki N, et al.
A nitrate-inducible GARP family gene encodes an auto-repressible transcriptional repressor in rice.
Plant Cell Physiol., 2013. 54(4): p. 506-17
[PMID:23324170] - Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
Plant Cell Physiol., 2016. 57(6): p. 1142-52
[PMID:27016098]
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