PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_7162_iso_3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | BES1 | ||||||||
Protein Properties | Length: 192aa MW: 21934.8 Da PI: 8.731 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 120.9 | 1.7e-37 | 36 | 109 | 3 | 76 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 + r p++kEr nnk+RER+RRai+ i+aGLRa+Gny+lpk D n+ l+ALc+eAGw ve+DGt yrk + p+ cra_locus_7162_iso_3_len_768_ver_3 36 KLRFPSEKERLNNKQRERKRRAITHNIFAGLRAHGNYQLPKNPDSNDLLRALCEEAGWHVEEDGTIYRKVTWPP 109 6799*****************************************************************98887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.7E-34 | 37 | 110 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045492 | Biological Process | xylan biosynthetic process | ||||
GO:0005794 | Cellular Component | Golgi apparatus | ||||
GO:1990538 | Molecular Function | xylan O-acetyltransferase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MGEEYERNSV LRGCIKKTKG PWVVRRATKN RGTVTKLRFP SEKERLNNKQ RERKRRAITH 60 NIFAGLRAHG NYQLPKNPDS NDLLRALCEE AGWHVEEDGT IYRKVTWPPF SLFPSPVVIF 120 GFKNLILASI FXQEPALKAP NLMEMDSSFQ ALVDDQNYCT CEDKKMESEF VADFCQKSSL 180 GAGNDTDLTL SI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-13 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-13 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-13 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-13 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009795965.1 | 5e-51 | PREDICTED: uncharacterized protein LOC104242587 | ||||
TrEMBL | A0A068UD63 | 2e-52 | A0A068UD63_COFCA; Uncharacterized protein | ||||
STRING | XP_009795965.1 | 2e-50 | (Nicotiana sylvestris) |