PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_68285_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family Trihelix
Protein Properties Length: 129aa    MW: 14829.3 Da    PI: 4.9005
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_68285_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.81.8e-106742186
                             trihelix 21 lrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86
                                         l+r++l+  +W ev++k+    g+ +s ++C++ ++ l+++ykk+ +  +k    ++ +s++p+f++++
  cra_locus_68285_iso_1_len_383_ver_3  6 LGRRSLRSEDWGEVAEKVtDMIGVDKSEIECRNQLDVLKNKYKKEITKLEKTggGAGFHSKWPFFKKMD 74
                                         6788999***********6678**********************9887776534588999********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.7E-12476No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
XRYLELGRRS LRSEDWGEVA EKVTDMIGVD KSEIECRNQL DVLKNKYKKE ITKLEKTGGG  60
AGFHSKWPFF KKMDMLMNLR MKGHCGLGCG LDSGEYVFMD PRMYLDRSNV LDEMRDSPAG  120
SDADEEEEX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488769.12e-74PREDICTED: trihelix transcription factor ASIL2-like isoform X3
TrEMBLA0A2G2WS772e-73A0A2G2WS77_CAPBA; Uncharacterized protein
STRINGXP_009590626.11e-73(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA120602022