 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
cra_locus_64817_iso_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
NF-YB |
| Protein Properties |
Length: 208aa MW: 23825.2 Da PI: 4.9403 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_64817_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 152.8 | 6.3e-48 | 56 | 148 | 3 | 95 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGf 76
++ r+lPianv+rimk++lP+ ak+sk+aket+qec++efisfvtseasdkc++e+rkt+ngdd++wal++lGf
cra_locus_64817_iso_1_len_623_ver_3 56 HDSRLLPIANVGRIMKQILPTSAKVSKEAKETMQECATEFISFVTSEASDKCHKENRKTVNGDDICWALSSLGF 129
6789********************************************************************** PP
NF-YB 77 edyveplkvylkkyreleg 95
++y+e++ yl+k re+e+
cra_locus_64817_iso_1_len_623_ver_3 130 DNYAEAMLRYLQKLREFER 148
*****************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 208 aa
Download sequence Send
to blast |
RPGDILTYVX TQVRKTHIHV NMYTYIYHSR SLLVIEGNVS ASEKSNIAEM VEEMQHDSRL 60
LPIANVGRIM KQILPTSAKV SKEAKETMQE CATEFISFVT SEASDKCHKE NRKTVNGDDI 120
CWALSSLGFD NYAEAMLRYL QKLREFERLR VINQTKANNF NNIIAQDRVS EEEESETPAP 180
FEFRVLEKGE NSQSHGKPAA LEEEEEEX
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. |
