PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

NAC

Protein Properties

Length: 363aa MW: 41143.9 Da PI: 7.8062

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_5600_iso_4	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.9	5e-33	93	234	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskr 64 lp+G++F+P+d+e++ e+L++k+ +++ + +e+i+++d i++++P++Lp v+++ + +fF+k cra_locus_5600_iso_4_len_1324_ver_3 93 LPAGVKFDPSDQEIL-EHLEAKALSDTrklhplI--DEFIPTLDgengICYTHPEKLP-GVSKDGQIRHFFHKP 162 799*********9.999999988885664322..334665555556******.555666777** PP NAM 65 dkkyatgkrknratk.......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +k+y+tg+rk+r+++ + +W++tgk+++v++ +g l+g kk+Lv+y gr++k+ekt+Wvmh+y+l cra_locus_5600_iso_4_len_1324_ver_3 163 SKAYTTGTRKRRKVHtdseiggETRWHKTGKTRPVFV-GGILKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 234 ********7443455555788********.**********66589************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.62E-38	85	253	IPR003441	NAC domain
PROSITE profile	PS51005	33.55	93	253	IPR003441	NAC domain
Pfam	PF02365	4.6E-14	94	234	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:2000652	Biological Process	regulation of secondary cell wall biogenesis
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
KILLNTHKTV EXVEESREEN PNWDGHKRKG KEMKWYNNES TRETSLQIVS APPHPPAPDI 60 TKVDEIRTLR CPSCGHTIQL QHQTAILEDL PGLPAGVKFD PSDQEILEHL EAKALSDTRK 120 LHPLIDEFIP TLDGENGICY THPEKLPGVS KDGQIRHFFH KPSKAYTTGT RKRRKVHTDS 180 EIGGETRWHK TGKTRPVFVG GILKGYKKIL VLYTNYGRQR KPEKTNWVMH QYHLGSDEEE 240 KDGELVVSKV FYQTQPRQCN TSTTTTTNVL KQVDNQKILS RQDGGINVNN MVTKSINPPN 300 FMEYYGGSHD HDDEYLSYNV GISQSRGETP PQPHQLIPNM VHVHATDDGS SFIQLPSTAS 360 KAQ

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

KILLNTHKTV EXVEESREEN PNWDGHKRKG KEMKWYNNES TRETSLQIVS APPHPPAPDI  60
TKVDEIRTLR CPSCGHTIQL QHQTAILEDL PGLPAGVKFD PSDQEILEHL EAKALSDTRK  120
LHPLIDEFIP TLDGENGICY THPEKLPGVS KDGQIRHFFH KPSKAYTTGT RKRRKVHTDS  180
EIGGETRWHK TGKTRPVFVG GILKGYKKIL VLYTNYGRQR KPEKTNWVMH QYHLGSDEEE  240
KDGELVVSKV FYQTQPRQCN TSTTTTTNVL KQVDNQKILS RQDGGINVNN MVTKSINPPN  300
FMEYYGGSHD HDDEYLSYNV GISQSRGETP PQPHQLIPNM VHVHATDDGS SFIQLPSTAS  360
KAQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269\|PubMed:18952777, ECO:0000269\|PubMed:22133261}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00459	DAP	Transfer from AT4G28500	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021660928.1	1e-140	NAC domain-containing protein 73-like
Refseq	XP_021660929.1	1e-140	NAC domain-containing protein 73-like
Refseq	XP_021660930.1	1e-140	NAC domain-containing protein 73-like
Refseq	XP_021660931.1	1e-140	NAC domain-containing protein 73-like
Refseq	XP_021660932.1	1e-140	NAC domain-containing protein 73-like
Refseq	XP_021660933.1	1e-140	NAC domain-containing protein 73-like
Swissprot	O49459	1e-117	NAC73_ARATH; NAC domain-containing protein 73
TrEMBL	A0A2C9U8J0	1e-138	A0A2C9U8J0_MANES; Uncharacterized protein
STRING	XP_009797428.1	1e-138	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2875	24	54

Publications ? help Back to Top
Srinivasasainagendra V,Page GP,Mehta T,Coulibaly I,Loraine AE CressExpress: a tool for large-scale mining of expression data from Arabidopsis. Plant Physiol., 2008. 147(3): p. 1004-16 [PMID:18467456] Sakamoto S,Mitsuda N Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol., 2015. 56(2): p. 299-310 [PMID:25535195] Jervis J, et al. A metabolomic assessment of NAC154 transcription factor overexpression in field grown poplar stem wood. Phytochemistry, 2015. 115: p. 112-20 [PMID:25771508]