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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
cra_locus_43336_iso_1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family |
HSF |
Protein Properties |
Length: 77aa MW: 8830.96 Da PI: 4.407 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
cra_locus_43336_iso_1 | genome | MPGR | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 65.9 | 8.9e-21 | 25 | 77 | 2 | 54 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHH CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFv 54
Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFv
cra_locus_43336_iso_1_len_345_ver_3 25 FLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFV 77
9***************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hdg_A | 1e-12 | 21 | 77 | 7 | 62 | Heat shock factor protein 1 |
5hdn_A | 1e-12 | 21 | 77 | 7 | 62 | Heat shock factor protein 1 |
5hdn_B | 1e-12 | 21 | 77 | 7 | 62 | Heat shock factor protein 1 |
5hdn_C | 1e-12 | 21 | 77 | 7 | 62 | Heat shock factor protein 1 |
5hdn_D | 1e-12 | 21 | 77 | 7 | 62 | Heat shock factor protein 1 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000269|PubMed:16202242}. |