 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
cra_locus_42582_iso_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
HSF |
| Protein Properties |
Length: 192aa MW: 21443.8 Da PI: 8.6436 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_42582_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 46.6 | 9.2e-15 | 2 | 46 | 50 | 103 |
HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS
HSF_DNA-bind 50 faSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103
f+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++i+r+k++
cra_locus_42582_iso_1_len_575_ver_3 2 FSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCEIHRRKTA 46
89****************99.........**********************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 192 aa
Download sequence Send
to blast |
XFSSFVRQLN TYGFRKIVPD RWEFANEFFK KGEKHLLCEI HRRKTAQPQV HHHHHHALGG 60
GGPNFFPYPN RVSISPPDSD DQLLPNWCDS PPPPPLLSNS SPCGGVGNIT TINYNNNSSS 120
CSSSVTSLSE DNERLRRSNN MLMSELAHMR KLYNDIIYFV QNHVKPVAPS NSFPSSLLLP 180
SSATTPPING SS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
