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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
cra_locus_39712_iso_1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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| Family |
Trihelix |
| Protein Properties |
Length: 177aa MW: 20703.3 Da PI: 6.0799 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_39712_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 63.8 | 3.8e-20 | 87 | 157 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
W + e+ Li++r++me+r+++ g+ ++ lWee+++km+ g+ rs +Ck+kw+++++++ k+++ +k++
cra_locus_39712_iso_1_len_528_ver_3 87 WEEFETTRLIQLRTSMETRFQQiGCPEQLLWEEIASKMACLGYDRSGLMCKDKWDSISNYFIKCTKKRKEN 157
999******************879*****************************************999875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
XLMEKQESWL EKIMGAIEKK EQERMLREEE WRKQEAVRID REHKFWANER AWIEARDAAL 60
METLRKLSGK EVMTDGLMKS SNDSSGWEEF ETTRLIQLRT SMETRFQQIG CPEQLLWEEI 120
ASKMACLGYD RSGLMCKDKW DSISNYFIKC TKKRKENSRF FCYLTNESIG GGGGGGG
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
