PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

cra_locus_282_iso_2

Organism

Catharanthus roseus

Taxonomic ID

4058

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

BES1

Protein Properties

Length: 234aa MW: 24650.4 Da PI: 7.4636

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_282_iso_2	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	33.5	1.5e-10	1	74	79	150
DUF822 79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 +ea+++s+++s++sslq s+ ss+++spv+sy+asp+ss psp++ d + + + + +lp+l++l+++++sl cra_locus_282_iso_2_len_2381_ver_3 1 MEAGVASTNISTCSSLQPSPLSSSFPSPVPSYHASPSSSLCPSPTRGDGNGNGGNpsSYILPFLRNLASIPNSL 74 578889****************************************9988877789999***99998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.1E-9	3	67	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009741	Biological Process	response to brassinosteroid
GO:0005634	Cellular Component	nucleus
GO:0005737	Cellular Component	cytoplasm
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence Send to blast
MEAGVASTNI STCSSLQPSP LSSSFPSPVP SYHASPSSSL CPSPTRGDGN GNGGNPSSYI 60 LPFLRNLASI PNSLPPLRIS NSAPVTPPLS SPTRGSKRKP EWEPFSNVQL PSFPHNLFAA 120 SAPSSPTRRR HLKPATIPEC DESDVSTVDS ARWVSFQTTP AAPSSPTFNL IKPASKQNLP 180 VDGCSQFAWG VAPQRGCGSE FAFESGTIKA WEGERAHEIG VDDLELTLGS GKAH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027178675.1	1e-101	BES1/BZR1 homolog protein 2-like
Swissprot	Q94A43	2e-62	BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBL	A0A068U2N4	1e-100	A0A068U2N4_COFCA; Uncharacterized protein
STRING	XP_009349751.1	4e-96	(Pyrus x bretschneideri)