 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
cra_locus_27627_iso_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
G2-like |
| Protein Properties |
Length: 295aa MW: 32545.8 Da PI: 9.3292 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_27627_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.7 | 2.3e-32 | 102 | 155 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
cra_locus_27627_iso_1_len_943_ver_3 102 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 155
9****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009887 | Biological Process | organ morphogenesis |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009956 | Biological Process | radial pattern formation |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010158 | Biological Process | abaxial cell fate specification |
| GO:0010229 | Biological Process | inflorescence development |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
SSSSTPPYFD HLSILNSPNN PLSPAAAYRI TGGGGSTRFN GLSSSYLHHH QYGGGGGLGS 60
DHHHHHHHHQ SNISHHHHGM MMRSSSSRFL PKLPQKRSMR APRMRWTSTL HARFVHAVEL 120
LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KPAASSGQSD GSGDEDLSTM 180
GSVGGGDRSG LRRLMDQRGP SDGQQESDYP STTTTLWSNS SSSREAWLQT NTGDMNGHRS 240
NSTHTPLLEQ RSPRQIIEEC DSSRTNSYLL SGLNHKNPSL EFTLGRPDWV EKEHA
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 7e-16 | 103 | 157 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-16 | 103 | 157 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-16 | 103 | 157 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-16 | 103 | 157 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
