 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
cra_locus_26589_iso_1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
LBD |
| Protein Properties |
Length: 181aa MW: 20131.3 Da PI: 7.8397 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_26589_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 144.5 | 3.2e-45 | 34 | 132 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvy 74
+CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvy
cra_locus_26589_iso_1_len_539_ver_3 34 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVY 107
7************************************************************************* PP
DUF260 75 Gavgvilklqqqleqlkaelallke 99
G+vg i+ lq+q+++l++el+++++
cra_locus_26589_iso_1_len_539_ver_3 108 GCVGAISFLQRQVDRLQKELDAANA 132
********************99876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
| Sequence ? help Back to Top |
| Protein Sequence Length: 181 aa
Download sequence Send
to blast |
XYGLLSQREA SLIIWDFGFV AKDHMASSSS YNSPCAACKF LRRKCMPGCI FAPYFPPEEP 60
QKFANVHKIF GASNVTKLLN ELLPHQREDA VNSLAYEAEA RVRDPVYGCV GAISFLQRQV 120
DRLQKELDAA NADLIRFACN EMPTTTHGHG GFNHQIMTRR SSMGNEGANI GGFYQTPNTS 180
X
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Positively regulated within the shoot apex by both ASYMMETRIC LEAVES 1 (AS1) and ASYMMETRIC LEAVES 2 (AS2/LBD6) and by KNAT1. {ECO:0000269|PubMed:11934861}. |
