 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
cra_locus_2625_iso_10 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
NF-YB |
| Protein Properties |
Length: 189aa MW: 20573.9 Da PI: 7.6241 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_2625_iso_10 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 184.9 | 6.1e-58 | 26 | 123 | 1 | 98 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalat 73
vreqdrflPian++rimkk+lPan+ki+k+ak+tvqecvsefisf+tseasdkcqrekrktingddllwa+at
cra_locus_2625_iso_10_len_1526_ver_3 26 VREQDRFLPIANIGRIMKKALPANGKIAKEAKDTVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMAT 98
69*********************************************************************** PP
NF-YB 74 lGfedyveplkvylkkyrelegekk 98
lGfe+yv+plkvyl++yre+eg++k
cra_locus_2625_iso_10_len_1526_ver_3 99 LGFEEYVDPLKVYLTRYREMEGDTK 123
**********************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MAEAPPVSPV GGGIESGGDQ SPQSNVREQD RFLPIANIGR IMKKALPANG KIAKEAKDTV 60
QECVSEFISF ITSEASDKCQ REKRKTINGD DLLWAMATLG FEEYVDPLKV YLTRYREMEG 120
DTKGSAKGAD GSAKRDASQL GHSSQLAHHG SFTQGMNYGN SQGRGXPVLL IVRSMVYNHE 180
LTRIHFGAP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. |
