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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
cra_locus_23355_iso_1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
G2-like |
| Protein Properties |
Length: 401aa MW: 44074.2 Da PI: 7.7908 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_23355_iso_1 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.7 | 4.8e-32 | 293 | 348 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
cra_locus_23355_iso_1_len_1202_ver_3 293 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 348
68****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 401 aa
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to blast |
EEKLKLMMAS PSELSLECKT QYSCSMLLKS VGGEQSDIQT QKLEDFLARL EEERLKIDAF 60
KRELPLCMQL LTNAMEASRQ QLHSYRANNN EGPKPILEEF IPLKHHNPAI SEGSEKTNNN 120
NTNVNVVSDK ANWMTSAQLW SQASSGGTSA GGVDHEIIAK QQQQSPAAAV TSPKESDDHM 180
GFGVNLKQSE NNNNNNNQRN GNGNGGGGFL PFSKERNLNR GGAVVVPELA LSSTDHHHNH 240
HEIMEEKKII NSEGTSSDNM MMMMRRDQNL LGNNNNKSAA GESQTTTNQS HRKARRCWSP 300
DLHRRFVNAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQSAA 360
AAAPQLVVLG GIWVPPEYAT AAAAHHAGGP PTLYPTTHSS P
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 8e-14 | 293 | 346 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-14 | 293 | 346 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-14 | 293 | 346 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-14 | 293 | 346 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 8e-14 | 293 | 346 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
