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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
cra_locus_18534_iso_1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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| Family |
SRS |
| Protein Properties |
Length: 223aa MW: 23798.3 Da PI: 8.8966 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_18534_iso_1 | genome | MPGR | - |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 200.3 | 6e-62 | 2 | 139 | 17 | 155 |
DUF702 17 kdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalss 88
kdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqq+ a+ss +++++ + ++skr+re + s+l++
cra_locus_18534_iso_1_len_693_ver_3 2 KDCTHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQQLASSSLQQNQQhlRGENSKRPRE----NPSSLAC 71
9***********************************777655554444333247777888886....599**** PP
DUF702 89 tklssaeskkeletsslPeevsseavfrcvrvssvdd.geeelaYqtavsigGhvfkGiLydqGleek 155
t+l++++s e+ ++P+evss+avfrcvrvs++d+ +e+++aYqtav+igGhvfkGiLydqGl+++
cra_locus_18534_iso_1_len_693_ver_3 72 TRLPTSSSGLEMVGGQFPAEVSSAAVFRCVRVSAMDEaEEQQYAYQTAVNIGGHVFKGILYDQGLDHQ 139
*************************************55667***********************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 223 aa
Download sequence Send
to blast |
XKDCTHLRCR TCCKSRGFQC QTHVKSTWVP AAKRRERQQQ QLASSSLQQN QQHLRGENSK 60
RPRENPSSLA CTRLPTSSSG LEMVGGQFPA EVSSAAVFRC VRVSAMDEAE EQQYAYQTAV 120
NIGGHVFKGI LYDQGLDHQT TTAGRYSTAT TGVGGNTSSG GGTDGGGGVH PPQPPPLNLI 180
GTTSSAPTAA TAGITMHMLD HSIYPTPLSA FMAGTQFFPP PRS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:12361963, ECO:0000269|PubMed:16740145, ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:18811619, ECO:0000269|PubMed:20154152, ECO:0000269|PubMed:22318676}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Regulated by ESR1 and ESR2. {ECO:0000269|PubMed:21976484}. |
