PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_16930_iso_2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family Trihelix
Protein Properties Length: 222aa    MW: 25113.2 Da    PI: 5.0253
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_16930_iso_2genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.25.6e-10129182264
                             trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                                          W+++evlaL+++r+     +         We+vs+k++e gf+rs++ Ckek+e+ ++ +   
  cra_locus_16930_iso_2_len_664_ver_3 129 WSNDEVLALLRIRSW----FP-----DFTWEHVSRKLAEVGFQRSAENCKEKFEEQSRHFGDN 182
                                          999999999999874....44.....358*************************999888655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.3E-7128190No hitNo description
PROSITE profilePS500906.214129176IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
XFTPTEFHTH KKRGEKVMFD GGVPADQFHQ FIASRSSIPL PLSFPHNHHG VTIVSSSPPP  60
PPITTTTFAG GCFESYPEGF FPPPPPPPHC HHHNPVAATA VNKVEEVVMV KEEGSRSVVS  120
VSDGSVEEWS NDEVLALLRI RSWFPDFTWE HVSRKLAEVG FQRSAENCKE KFEEQSRHFG  180
DNMSYNKSNY RFLSDLDEIY HGENPEKTQD LAQGNEEEEE EX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6RBE91e-38A0A2R6RBE9_ACTCH; Trihelix transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137001013