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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
cra_locus_15360_iso_1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family |
MYB |
Protein Properties |
Length: 397aa MW: 42955.9 Da PI: 6.8521 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
cra_locus_15360_iso_1 | genome | MPGR | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.1 | 1.8e-17 | 26 | 71 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd +l ++v +G ++W++Iar ++ gR++k+c++rw +
cra_locus_15360_iso_1_len_2072_ver_3 26 KGPWSPEEDAILSRLVSNFGARNWSLIARGIP-GRSGKSCRLRWCNQ 71
79******************************.***********985 PP
|
2 | Myb_DNA-binding | 57.5 | 3.2e-18 | 78 | 122 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r+++T++Ed ++++a++ +G++ W++Iar ++ gRt++ +k++w++
cra_locus_15360_iso_1_len_2072_ver_3 78 RKPFTEDEDRIILQAHAIHGNK-WASIARLLP-GRTDNAIKNHWNST 122
789*******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
XGSGGGGGGS SSSSSQVSKK SLDRVKGPWS PEEDAILSRL VSNFGARNWS LIARGIPGRS 60 GKSCRLRWCN QLDPAVKRKP FTEDEDRIIL QAHAIHGNKW ASIARLLPGR TDNAIKNHWN 120 STLRRRCIDP SKFKFESSNV LEDVSVEKSK GSSDETLSCG DVNSLKSLEG RDITSNENID 180 DDLYEGKTQI GDKTQTEIQC NPEPKDPPTL FRPRARISAF SVYSPVDVVE TSLPSAVAVS 240 SQGPLDQVPR PEAGISKLLQ GAYSDRLIPY QCGHGCCMSP DGGKLHSSLL GPEFVDYTEP 300 LSFPSHELAT LAADISNAAW RRSGLESICV KPLESAASAL PFISSHLQMG YPEEGMRTDG 360 LQFDKGTSSL AGMFSDALSN PLRMQAMQIN ANVGSRI
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid. {ECO:0000269|PubMed:16463103}. |