 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
cra_locus_1415_iso_2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
| Family |
FAR1 |
| Protein Properties |
Length: 201aa MW: 22938 Da PI: 9.8536 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_1415_iso_2 | genome | MPGR | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 65.4 | 1.6e-20 | 48 | 131 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkw 76
fY+eYA ++GF +r+ +s+ks+r+g+i++r + C ++++ + +++r + gC+a+l +k+ek g+w
cra_locus_1415_iso_2_len_744_ver_3 48 FYDEYAGRTGFITRVLSSRKSERDGSIISRGLGCRGISDSQKSGN----GSQKRDRRKEGCTAMLLIKREKPGRW 118
9*********************************86666555554....588999999***************** PP
FAR1 77 evtkleleHnHel 89
v k+ +HnH+l
cra_locus_1415_iso_2_len_744_ver_3 119 IVRKFLRDHNHSL 131
***********99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MNVDMTADDG SRKTEASVCG EMGLCVTDNS REPYEGMVFD SEEAARAFYD EYAGRTGFIT 60
RVLSSRKSER DGSIISRGLG CRGISDSQKS GNGSQKRDRR KEGCTAMLLI KREKPGRWIV 120
RKFLRDHNHS LLVSLPKRRP TFDEKDKRIQ ELTAELRIKK RLSAAYHEQL LTIMKDVESH 180
NEHLSTKLQT VRDNLKKLDT T
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
