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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_1368_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | NAC | ||||||||
Protein Properties | Length: 298aa MW: 33818 Da PI: 5.5053 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.7 | 1.3e-11 | 126 | 173 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lp GfrF P d el+ +yL kk+++ +l+ ++ik+v++y+++P++L + cra_locus_1368_iso_1_len_1263_ver_3 126 LPSGFRFCPYDIELIRDYLMKKIAHPQLNW-DHIKQVQLYDCDPSQLAA 173 699**************************9.89**************74 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.45E-22 | 116 | 255 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-8 | 127 | 220 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence Send to blast |
TTTTTTTTTT TTTTTTHSET NYTHNNINDH QYILGQPTLA SSGGGGEIGG IAALDNYSLF 60 GDQQGHDHDI INNINIDHCM SGFYDHENLF LDQYYEPIQA VPVSDVPDVH VHVVNNNNIN 120 NERMMLPSGF RFCPYDIELI RDYLMKKIAH PQLNWDHIKQ VQLYDCDPSQ LAACYPNDEG 180 IEIGNKRPLV FYQGKHKDNR ERSSKEEPKK TDWIMYEYQV HDPTTTTSNS NRRKRDEFEN 240 TTMRLDGXVL CKISRSGRSF KSQENERNNV KAEAIPSTSY PTNIENILAA AAGSNPSY |