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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
cra_locus_110461_iso_1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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| Family |
LBD |
| Protein Properties |
Length: 134aa MW: 14543.8 Da PI: 8.7689 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| cra_locus_110461_iso_1 | genome | MPGR | - |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 140.2 | 6.9e-44 | 15 | 114 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPv 73
+CaaCk+lrr+CakdCv+ap+fpa++p+kfa vhk+FGasnv+k+l++l e++r+da+s++vyeA+ar+rdPv
cra_locus_110461_iso_1_len_463_ver_3 15 PCAACKLLRRRCAKDCVFAPHFPADDPQKFASVHKVFGASNVSKMLQELGEDQRSDAVSAMVYEANARVRDPV 87
7************************************************************************ PP
DUF260 74 yGavgvilklqqqleqlkaelallkee 100
yG+v+ i++lqqq++ l+++la +++e
cra_locus_110461_iso_1_len_463_ver_3 88 YGCVAAISSLQQQVDILQTQLAFAQAE 114
**********************99876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 134 aa
Download sequence Send
to blast |
MKEMMKGRKL EVASPCAACK LLRRRCAKDC VFAPHFPADD PQKFASVHKV FGASNVSKML 60
QELGEDQRSD AVSAMVYEAN ARVRDPVYGC VAAISSLQQQ VDILQTQLAF AQAEVVQMRM 120
RGGSSASTPA PIPA
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