PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID augustus_masked-scaffold19582-abinit-gene-0.0-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family EIL
Protein Properties Length: 340aa    MW: 38285.5 Da    PI: 4.3777
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
augustus_masked-scaffold19582-abinit-gene-0.0-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3110.53.1e-3438115181
                                                           XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXX CS
                                                  EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiL 57 
                                                           eel++rmwkd+++lkrlker+k    +++ a++++k +++++qarrkkmsraQDgiL
  augustus_masked-scaffold19582-abinit-gene-0.0-mRNA-1  38 EELERRMWKDRIKLKRLKERQKIA--AQQ-AAEKQKPKQTTDQARRKKMSRAQDGIL 91 
                                                           8*******************9964..455.599************************ PP

                                                           XXXXXXXXXXXXXXXXXXXXXXXX CS
                                                  EIN3  58 kYMlkemevcnaqGfvYgiipekg 81 
                                                           kYMlk mevc+a+GfvYgiipekg
  augustus_masked-scaffold19582-abinit-gene-0.0-mRNA-1  92 KYMLKLMEVCKARGFVYGIIPEKG 115
                                                           **********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.9E-3238116No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MDHLIDDTLG DSSDLEVDDL RCDNIADKDV SDEEIEAEEL ERRMWKDRIK LKRLKERQKI  60
AAQQAAEKQK PKQTTDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGGRGGN  120
KQAAVSSDSD YDVDGVDDVT LPDVNHTDMQ VGFQTHGDQQ EADTIAALRP LEKDFDVQPQ  180
IPAIEFNYFA AIPADNLSST QSMYVDGRPL LYPVMQNTEM HHGDNRNFYN PSVEYGQTHD  240
RQQSQIVMNE PQIRPEEVGV HVPALHGSAT DIPRGDLHYY VKDAFNNEQH LPVDSQFGSA  300
IDSLSLDCGG LGSPLNLDLE GLSSFEDMMY DDNLIEYFGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ2989941e-152AJ298994.1 Fagus sylvatica mRNA for EIN3/EIL-like transcription regulator (einl1 gene), clone FsEINL1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023890819.11e-143ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2N9HGR81e-106A0A2N9HGR8_FAGSY; Uncharacterized protein
STRINGEMJ095056e-67(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1820556
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.19e-34ETHYLENE-INSENSITIVE3-like 3