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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family | BES1 | ||||||||
Protein Properties | Length: 255aa MW: 26560.6 Da PI: 8.0612 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 111.2 | 1.7e-34 | 32 | 131 | 4 | 96 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGw 60 +t+ E+E++k RER RRai++ki+ GLR++G+y+l raD+ne l+ L+ eAGw augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1 32 SVGRTESEKEKTKMRERNRRAITTKIFQGLRKHGGYCLSPRADINELLRHLASEAGW 88 5567999************************************************** PP DUF822 61 vvedDGttyrkgskpl......eeaeaag.ssasaspesslqs 96 vv +DGtt+r +++ ++ +g +s++++p+ss+ + augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1 89 VVLPDGTTFRSSTSSSsnglscCAMCGTGiTSNNTTPCSSVVM 131 **********877766434433222222214555666776654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 6.0E-31 | 35 | 166 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MKEAAMGNAV EEGEASGTHQ GKTMKRSNGG SSVGRTESEK EKTKMRERNR RAITTKIFQG 60 LRKHGGYCLS PRADINELLR HLASEAGWVV LPDGTTFRSS TSSSSNGLSC CAMCGTGITS 120 NNTTPCSSVV MGGGGGGGGE YCASTTASPI GDSMSMSMSM SVSMVNNNIN RIGFGGSTSS 180 SLPEGENSPL ELYIYDNGLP GGLHHHPSSA SGGCVGGPLV MGPQYPQQQQ QIQLYVQEAM 240 ASNQNTPVGS PLRRA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023927430.1 | 1e-144 | protein BZR1 homolog 4-like | ||||
TrEMBL | A0A2N9GPL0 | 2e-92 | A0A2N9GPL0_FAGSY; Uncharacterized protein | ||||
STRING | XP_010098573.1 | 3e-52 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13979 | 16 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 4e-23 | beta-amylase 7 |