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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
augustus_masked-scaffold03368-abinit-gene-0.1-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 316aa MW: 35246.9 Da PI: 6.6542 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold03368-abinit-gene-0.1-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.3 | 6.4e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++lvd +k+ Gg+ +W++ ++ g+ R++k+c++rw +yl
augustus_masked-scaffold03368-abinit-gene-0.1-mRNA-1 14 KGPWTPEEDQILVDFIKKNGGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62
79*******************9***********99************97 PP
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2 | Myb_DNA-binding | 51.4 | 2.4e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE++l ++++ lG++ W+tIa+ ++ gRt++++k+ w+++l
augustus_masked-scaffold03368-abinit-gene-0.1-mRNA-1 68 RGPFTQEEEKLVIQLHGILGNR-WATIASQLP-GRTDNEIKNLWNTHL 113
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MGRAPCCDKK GLKKGPWTPE EDQILVDFIK KNGGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTQEEEKLVI QLHGILGNRW ATIASQLPGR TDNEIKNLWN THLKKRLMGM 120 GLDPQTHELI TSCSTTVKAP ASPITRHMAQ WESARLEAEA RLSRESSLFN PIPLGKTDSD 180 YFLRIWNSEI GQSFRKINRE DKTACQSPVS QASSSTKCGS ISATTTEISP ILLGSSIAGS 240 NQNEDNECKS CKSYPEEIMA GYYTSSSDEL EDSSDSALQM LLDFPINNDM SFLEEDVDKY 300 STPSAMLTEN SFICPL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |