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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
augustus_masked-scaffold02249-abinit-gene-0.4-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
B3 |
Protein Properties |
Length: 249aa MW: 29359.3 Da PI: 9.6858 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold02249-abinit-gene-0.4-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 31.2 | 3.9e-10 | 127 | 213 | 2 | 80 |
EEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE CS
B3 2 fkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkl 50
+k+lt+ d +rl++ k ++e++ +++ ee++ ++++de+g+++ + +
augustus_masked-scaffold02249-abinit-gene-0.4-mRNA-1 127 EKQLTKTDLRDDqARLSIKKAYVEQYllnllneDENIEEGIPVIVYDENGKTYPMMF 183
577766666554599****************99666678999*************** PP
..EEETTEEEE-TTHHHHHHHHT--.TT-EE CS
B3 51 iyrkksgryvltkGWkeFvkangLk.egDfv 80
+ + ++ yvlt GWk F + +L Df+
augustus_masked-scaffold02249-abinit-gene-0.4-mRNA-1 184 KLWSSK-IYVLTHGWKTFYIDSKLHyHDDFI 213
888775.8***************99444554 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MEKRKWLCEI EKFNGDDEYS EECIKEEEAA LILLDMSNTK SLDKKTAMAL REQQRKRLEN 60 RTRLRQRLNL NPHVKGISKS IPKTLLPSMR GHEEILALFM KSSKAPLFPR ITSLLGLIKE 120 CCSVPYEKQL TKTDLRDDQA RLSIKKAYVE QYLLNLLNED ENIEEGIPVI VYDENGKTYP 180 MMFKLWSSKI YVLTHGWKTF YIDSKLHYHD DFITSVTLWT FRHLRTARLC FVIFTKTLPV 240 VKPVTRRIK
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 43 | 56 | KKTAMALREQQRKR |