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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
augustus_masked-scaffold01940-abinit-gene-0.3-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 198aa MW: 22559.6 Da PI: 9.6209 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold01940-abinit-gene-0.3-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57 | 4.5e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd++l+ +++++G g+W++ ++ g++R++k+c++rw +yl
augustus_masked-scaffold01940-abinit-gene-0.3-mRNA-1 13 KGAWSQEEDQKLIAYIQKHGEGCWRSLPKAAGLRRCGKSCRLRWINYL 60
79********************************************97 PP
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2 | Myb_DNA-binding | 53.7 | 4.9e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++
augustus_masked-scaffold01940-abinit-gene-0.3-mRNA-1 66 RGNFEEDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNEVKNHWNSH 110
899*******************.*********.***********987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MRKPCCKKEE TNKGAWSQEE DQKLIAYIQK HGEGCWRSLP KAAGLRRCGK SCRLRWINYL 60 RPDLKRGNFE EDEEDLIIRL HALLGNRWSL IAGRLPGRTD NEVKNHWNSH IRKKLTQMGI 120 DPNKPHKLGG TASFTGISFF SQNQAPNPVN VRRDDNQILG FESGVESNKT SCVPDLNLDL 180 TLSTPTSTLV EERQQPKP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |