|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
augustus_masked-scaffold01299-abinit-gene-0.1-mRNA-1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
Family |
B3 |
Protein Properties |
Length: 233aa MW: 26533.9 Da PI: 5.1397 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold01299-abinit-gene-0.1-mRNA-1 | genome | THGP | View Nucleic Acid |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 30.7 | 5.5e-10 | 123 | 228 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT..........---..--SEEEEEETTS.-EEE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeeh..........ggkkeesktltledesg.rsWe 47
k+lt+sd ++s+rl +p + + +h ++++ ++ +t+ d+++ +e
augustus_masked-scaffold01299-abinit-gene-0.1-mRNA-1 123 TKTLTKSDIGSSSRLLVPQSLVHAHimaffsadsvKKIECNGLSVTVFDRDSkSDYE 179
699*****************************8885555677789999977736799 PP
EEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE-.SSSEE..EEEE CS
B3 48 vkliyrkksgryvltkGW.keFvkangLkegDfvvFkld.grsefelvvkv 96
+ ++ + +s++yv+ + W ++Fv +Lk+gD++ ++ d +s+f ++ v
augustus_masked-scaffold01299-abinit-gene-0.1-mRNA-1 180 LVFKKWPSSKSYVFNGKWhEDFVARRKLKVGDIIGLYWDpCHSKF--NFCV 228
99999*************446****************65333555..5555 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MIPITQNLLQ TLENQNTQNY STDLTLSCEL HTELNACNEE EEEEEAMILD DDGTQNLLQT 60 LENQNTQTLS CVFNTKQEQK EVSTALTLFD KPWVSSNTMR KSTQKDEYAV ATKLSAVSPW 120 KITKTLTKSD IGSSSRLLVP QSLVHAHIMA FFSADSVKKI ECNGLSVTVF DRDSKSDYEL 180 VFKKWPSSKS YVFNGKWHED FVARRKLKVG DIIGLYWDPC HSKFNFCVLQ TAQ
|