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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
augustus_masked-scaffold01020-abinit-gene-0.4-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 308aa MW: 35315.6 Da PI: 8.5837 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold01020-abinit-gene-0.4-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 26.2 | 1.9e-08 | 28 | 73 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
+WT eE +++ +a +++ ++ +W +Ia++++ g+t ++ ++
augustus_masked-scaffold01020-abinit-gene-0.4-mRNA-1 28 NWTLEENKRFENALALFDKDtpdRWLKIAAMIP-GKTVGDVMKQYRE 73
8********************************.****999998875 PP
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2 | Myb_DNA-binding | 46 | 1.2e-14 | 135 | 179 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ +++ + k++G+g+W+ Iar ++Rt+ q+ s+ qky
augustus_masked-scaffold01020-abinit-gene-0.4-mRNA-1 135 PWTEEEHRQFLLGLKKYGKGDWRNIARNYVTTRTPTQVASHAQKY 179
7*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MNPEIEIQSP ASYFQNSNWL YQESKGTNWT LEENKRFENA LALFDKDTPD RWLKIAAMIP 60 GKTVGDVMKQ YRELEEDVSD IEAGLIPIPG YGSNSFTLEW VNNQGFGDLK QFYSVGGKRG 120 ASTRPSDQER KKGIPWTEEE HRQFLLGLKK YGKGDWRNIA RNYVTTRTPT QVASHAQKYF 180 IRQLSGGKDK RRSSIHDITT VNVPETKSPS SDSKRSPSPD HCAMVMQPQQ HLEMGIISRQ 240 QQYDWKTPYE TTTMAFNPAN VNMFMTPFCG ISSYGPNLQE QNLFRSTLHG SQFGAYNTMF 300 QMQPMQHQ
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |