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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
augustus_masked-scaffold00324-abinit-gene-1.1-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
B3 |
Protein Properties |
Length: 362aa MW: 40998 Da PI: 10.3277 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold00324-abinit-gene-1.1-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 48.6 | 1.4e-15 | 94 | 161 | 28 | 99 |
--..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
B3 28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84
++ e+ l+ ++g +Wev+l +k+ g+++l+kGW+eF++ Lk+g fvvF++
augustus_masked-scaffold00324-abinit-gene-1.1-mRNA-1 94 SSRSEDHLAFLTLPNGAKWEVEL--TKHNGEVWLQKGWREFAEYYSLKQGHFVVFRY 148
34445556677779*********..******************************** PP
-SSSEE..EEEEE-S CS
B3 85 dgrsefelvvkvfrk 99
+++s f +v +f+
augustus_masked-scaffold00324-abinit-gene-1.1-mRNA-1 149 EENSHF--HVLIFDP 161
999999..**99986 PP
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2 | B3 | 40.2 | 6.3e-13 | 274 | 351 | 11 | 90 |
HHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHH CS
B3 11 lksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWk 66
+ l++p +f++++ +++ + ++l+ ++ + + ++ +k++g+ ++ GW
augustus_masked-scaffold00324-abinit-gene-1.1-mRNA-1 274 VNAWYLSIPVHFTKKNYIQSGQR--VILKVgNQSCEVLFSISGEKRPGS--FSVGWA 326
555569**********7775554..555442444555555544666666..899*** PP
HHHHHHT--TT-EEEEEE-SS.SEE CS
B3 67 eFvkangLkegDfvvFkldgr.sef 90
F++ n+L++gD++vF+l++r +++
augustus_masked-scaffold00324-abinit-gene-1.1-mRNA-1 327 TFARKNRLQVGDVCVFELIKRnNNG 351
*******************885666 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEPWWPVKQK IVLAIKAKNG GVFSRHDAQP RAPAPAVKAP KFYPADDVKK PLVNKRKPKP 60 TKLSQVTEAA VQIGAGLCLR SVHLCSRSVA SSSSSRSEDH LAFLTLPNGA KWEVELTKHN 120 GEVWLQKGWR EFAEYYSLKQ GHFVVFRYEE NSHFHVLIFD PSATEIDYPS KSSNGHEEDQ 180 CDEDTDESDT FIQTLPNSCP LRPKRRDTSL LPSHRPRKKM KTTCTSGRIE SQKSKVNART 240 RQLTRIEKAK ALKKASGFKS ENPHFMVVMQ LSFVNAWYLS IPVHFTKKNY IQSGQRVILK 300 VGNQSCEVLF SISGEKRPGS FSVGWATFAR KNRLQVGDVC VFELIKRNNN GVVLLEVSIF 360 RD
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