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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
augustus_masked-scaffold00235-abinit-gene-1.11-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
NF-YB |
Protein Properties |
Length: 159aa MW: 18161.4 Da PI: 6.5205 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold00235-abinit-gene-1.11-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 175.8 | 4.4e-55 | 32 | 127 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqre 57
+eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++e
augustus_masked-scaffold00235-abinit-gene-1.11-mRNA-1 32 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKE 87
79****************************************************** PP
NF-YB 58 krktingddllwalatlGfedyveplkvylkkyrelegek 97
krkt+ngdd++walatlGf+dy+epl+ yl++yrelege+
augustus_masked-scaffold00235-abinit-gene-1.11-mRNA-1 88 KRKTVNGDDICWALATLGFDDYAEPLRRYLQRYRELEGER 127
*************************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MVDNMVNNSE REGFKYHFAG ASTSSGEDGV LKEQDRLLPI ANVGRIMKQI LPPNAKISKE 60 AKETMQECVS EFISFVTGEA SDKCHKEKRK TVNGDDICWA LATLGFDDYA EPLRRYLQRY 120 RELEGERAQQ SKGSNNEEKN EHQTMELKHQ GKQRIQLLP
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Functional Description ? help
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Source |
Description |
UniProt | Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. |