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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
augustus_masked-scaffold00017-abinit-gene-0.6-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
ZF-HD |
Protein Properties |
Length: 210aa MW: 23126.8 Da PI: 9.0131 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
augustus_masked-scaffold00017-abinit-gene-0.6-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 102 | 3.9e-32 | 3 | 58 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
+rY+eClkNhA+ +GghavDGCgEfm++ geegt +alkCaAC+CHRnFHR+ev++
augustus_masked-scaffold00017-abinit-gene-0.6-mRNA-1 3 MTRYRECLKNHAVGMGGHAVDGCGEFMAA-GEEGTLDALKCAACNCHRNFHRKEVND 58
689*************************9.999*********************976 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003677 | Molecular Function | DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MMMTRYRECL KNHAVGMGGH AVDGCGEFMA AGEEGTLDAL KCAACNCHRN FHRKEVNDHH 60 HRPSSEVYHH YQQQFTPYYP HRSPQPPHHS GYLHITTTSS QHHQRPPLAL PAASGGGGGQ 120 DLEDMSNPSS SGGGGGGGGG GGGGGYKKRF RTKFSQEQKE KMLQFAESLG WRIQKHDEAA 180 VDQFCADTGV RRQVLKVWMH NNKHTLGKKP
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Functional Description ? help
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Source |
Description |
UniProt | Essential protein. Putative transcription factor. |