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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc08964.1.g00010.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 204aa MW: 21443.7 Da PI: 5.318 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc08964.1.g00010.1.sm.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.8 | 4.1e-21 | 23 | 72 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g
Zpz_sc08964.1.g00010.1.sm.mk 23 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 72
59******9.**********955...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 204 aa
Download sequence Send
to blast |
PASGAGSGST AAASAHPPRP QKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEEAA 60 LAYDQAAYRL RGDAARLNFP DNAASRAPLE PAVDAKLQTI CATIAAASSS SKGKGRVGAV 120 PINMAPQAQP MSPSRSSSDE GSGSGSSDDD EAASSAAAAV AAVAPLAEMG QLDFSEVPWD 180 EAESFVLRKY PSYEIDWDAL LGSN
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP742345 | 1e-106 | KP742345.1 Saccharum spontaneum NAC1 protein mRNA, complete cds. |
Publications
? help Back to Top |
- Pati A,Vasquez-Robinet C,Heath LS,Grene R,Murali TM
XcisClique: analysis of regulatory bicliques. BMC Bioinformatics, 2006. 7: p. 218 [PMID:16630346] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Iwase A, et al.
WIND1-based acquisition of regeneration competency in Arabidopsis and rapeseed. J. Plant Res., 2015. 128(3): p. 389-97 [PMID:25810222] - Ikeuchi M, et al.
PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis. Nat Plants, 2015. 1: p. 15089 [PMID:27250255] - Iwase A, et al.
WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis. Plant Cell, 2017. 29(1): p. 54-69 [PMID:28011694]
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