PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc06417.1.g00010.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 292aa    MW: 31047 Da    PI: 8.503
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc06417.1.g00010.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.45.7e-32166221156
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                     k r++W+peLH++Fv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Zpz_sc06417.1.g00010.1.am.mkhc 166 KSRRCWSPELHHQFVAALNQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 221
                                     68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.404163223IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.9E-29164224IPR009057Homeodomain-like
SuperFamilySSF466898.96E-17164224IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-25166221IPR006447Myb domain, plants
PfamPF002491.9E-7168219IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MGLDVGEIGM GADLSLDLRH FAARAMRQSK NAPPASDMDA YIRRLEEERG KIEVFRRELP  60
ICARLLADVI DAVGSGAPAF GRPCLRNDDK AAGVGTPPDL SPLSPPAVKS VPAGAADKSN  120
CQVLGFAQAA ARAAAMVPSG PALSGLQRQP QQTTPPPQQQ QQQARKSRRC WSPELHHQFV  180
AALNQLGGPQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL HNRRTPAGST VVSQPIVLVG  240
GLWIPQEQSS SQSGSPQGPL HFSTSAGVAV SSTAATASCE EEDGRSESDG WK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-15166219154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-15166219154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-15166219154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-15166219154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc06417.1.g00010.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459272.26e-81transcription factor HHO2
TrEMBLA0A0A9IRT92e-85A0A0A9IRT9_ARUDO; Uncharacterized protein
STRINGSb02g001600.16e-81(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.11e-32G2-like family protein