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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc05656.1.g00010.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
NF-YC |
| Protein Properties |
Length: 285aa MW: 32709.6 Da PI: 9.2552 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc05656.1.g00010.1.am.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 125.6 | 1.9e-39 | 1 | 73 | 30 | 102 |
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdelk 102
+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdi+dflvdi+prde+k
Zpz_sc05656.1.g00010.1.am.mk 1 MKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPRDEMK 73
9*********************************************************************975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MKADEDVRMI SAEAPVVFAK ACEVFILELT LRSWMHTEEN KRRTLQKNDI AAAITRTDIY 60
DFLVDIIPRD EMKEEGLGLP RIGLPPAMGA PADIYPPYYY VPAQQEPGAG MMYGAQQGHT 120
MTYMWQHQQQ QPQGQEEEPP EDRQHPTRGP NNAQKFLQSR EGEEKEKKSN CVPFLLPDSG 180
GGERGGSRRA AATMGGEGKS RKRRSSPSSG EDEGRERKRR DKKESRRSVR DDRDEEDERH 240
KRRKKSKHSD RDKSKERDSK ERHSKDKEKS KRKDKDALEA LCFPA
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 41 | 47 | RRTLQKN |
| 2 | 199 | 204 | SRKRRS |
| 3 | 201 | 219 | KRRSSPSSGEDEGRERKRR |
| 4 | 215 | 220 | ERKRRD |
| 5 | 216 | 221 | RKRRDK |
| 6 | 216 | 223 | RKRRDKKE |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A (PubMed:26542958). Component of the NF-Y/HAP transcription factor complex (By similarity). {ECO:0000250, ECO:0000269|PubMed:26542958}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian-regulation under long day (LD) conditions. Expression increases in the middle of daytime, peaks around the end of the light period and gradually decreases during the dark period and beginning of daylight. {ECO:0000269|PubMed:26542958}. |
