PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc05215.1.g00010.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 249aa MW: 26715.1 Da PI: 9.2064 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.1 | 2.2e-09 | 114 | 167 | 1 | 54 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 eke kr rr NRe+Ar +R++a +eL++kv+ L+++N+++kk + + kk Zpz_sc05215.1.g00010.1.am.mk 114 EKEAKRLRRVLANRESARQTILRRQAIRDELTRKVADLSSQNESMKKVARTTKK 167 89********************************************98887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.1E-6 | 111 | 162 | No hit | No description |
SMART | SM00338 | 2.4E-8 | 114 | 177 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-8 | 114 | 167 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.508 | 116 | 160 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.09E-5 | 118 | 164 | No hit | No description |
CDD | cd14702 | 2.01E-12 | 119 | 160 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MSDDSDKQRQ CRRGVGVHEL DAAMALADLA GVSPEPQKLH LQPAAAAERE EDEELASTGL 60 SLELGKVGIH LSSPCSSTSS AGHHRHHPAQ QQQVQAPVSV YGSRPRHNML TEAEKEAKRL 120 RRVLANRESA RQTILRRQAI RDELTRKVAD LSSQNESMKK VARTTKKAPA AAPPSQQAVA 180 PSAASPQTTP PQPSFLSTVA PPTVPVPYVW GSWPPTTGHE HAGSPLAPAP LRLAPCAWYY 240 PAAAVEPTS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc05215.1.g00010.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ245750 | 4e-48 | DQ245750.1 Zea mays clone 20079 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014757911.2 | 6e-50 | uncharacterized protein LOC100826071 | ||||
TrEMBL | A0A1E5W7P6 | 5e-68 | A0A1E5W7P6_9POAL; Uncharacterized protein | ||||
STRING | Traes_5BL_6C613A3D9.1 | 4e-55 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3165 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 4e-09 | bZIP family protein |