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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc05021.1.g00020.1.am.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
SBP |
Protein Properties |
Length: 190aa MW: 21016.2 Da PI: 6.798 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc05021.1.g00020.1.am.mkhc | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 47.5 | 4.9e-15 | 35 | 66 | 47 | 78 |
SSEEETTT--SS--S-STTTT-------S--- CS
SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78
+fh+lsefD+ krsCrrrL++hn+rrrk+q+
Zpz_sc05021.1.g00020.1.am.mkhc 35 PKFHALSEFDQIKRSCRRRLNDHNARRRKQQP 66
59***************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MDWSQRGSML WDWENLSPIG ANSNDNPTIS LQAEPKFHAL SEFDQIKRSC RRRLNDHNAR 60 RRKQQPDAIS FGASRLSTMF YGIEASVAAN LNGAPDLQRA LSLLSNNSAD ASSDQPISQL 120 HPALVTIASS YNPVVQGSSG LWQDGTALDH EARFQAFDPV SNRSPIAAPH QLHLKLPAYD 180 SSPSRYDQMN
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Functional Description ? help
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Source |
Description |
UniProt | Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development. {ECO:0000250}. |
UniProt | Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development. {ECO:0000250}. |