PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04739.1.g00040.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 137aa    MW: 15119.9 Da    PI: 10.7783
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04739.1.g00040.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.86.8e-117597123
                                  ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY  1 ldDgynWrKYGqKevkgsefprs 23
                                  ldDg++WrKYGqK++ g+++prs
  Zpz_sc04739.1.g00040.1.sm.mk 75 LDDGFSWRKYGQKDILGAKYPRS 97
                                  59********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-96297IPR003657WRKY domain
SuperFamilySSF1182901.7E-86997IPR003657WRKY domain
PROSITE profilePS5081110.5337097IPR003657WRKY domain
SMARTSM007741.2E-575111IPR003657WRKY domain
PfamPF031067.7E-87698IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MNQQDLPPAA REICGELASR VERSLHVARS WVPPGYADGS TGGSAAKDAQ FKRRKGMPCV  60
RSQVRVASLH DTAALDDGFS WRKYGQKDIL GAKYPRSALD HQRPHVTNHS GAGNGRYWVI  120
GRVNRTKRTG FGFDRDG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04739.1.g00040.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025806380.12e-32probable WRKY transcription factor 30
TrEMBLA0A0A9HP891e-32A0A0A9HP89_ARUDO; Uncharacterized protein
STRINGPavir.J03334.1.p1e-31(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.14e-11WRKY DNA-binding protein 30