PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04432.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 606aa    MW: 67916 Da    PI: 7.3844
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04432.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS124.71.1e-38802934217
                          GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalkl 83 
                                   +L ecA +v++g +  a+++L+r+  la+  + pm Rla  ++ ALa+ l+     + +al +ps+    ++ ++ aa+  
  Zpz_sc04432.1.g00030.1.am.mk  80 ALWECAAHVAAGRFDGASRCLERVLGLAAIGDGPMPRLARILADALARCLLLRLGPVNRALiQPSAYL--DQRSVRAARYG 158
                                   699*********************************************99997888887774555554..33333345556 PP

                          GRAS  84 fsevsPilkfshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetg 162
                                   f+++ P+l++++++ N+aIl+a+++e+ vH+iD++  + ++ QW+ L++a+  Rp+g+p+l iT+v++    ++  l  + 
  Zpz_sc04432.1.g00030.1.am.mk 159 FVKLLPFLRVAYVAINRAILDATDKEKYVHVIDLSgpAANPWQWLKLMRAMHRRPGGAPNLHITVVHD----ERVFLADMW 235
                                   **********************************866799****************************....99******* PP

                          GRAS 163 erLakfAeelgvpfefnvlvakrledleleeL....rvkpgEalaVnlvlqlhrlldes 217
                                    rL+  Ae+l++ f f+     rle+l++++L    ++++g a   +++lq+hrll+ +
  Zpz_sc04432.1.g00030.1.am.mk 236 ARLRMEAESLNMAFTFHG-FLGRLETLDFDKLhdvlDIRSGYARCFSCALQMHRLLAVD 293
                                   ******************.689999999999866668899***************9765 PP
2GRAS165.64.1e-51294565167374
                          GRAS 167 kfAeelgvpfefnvlvakrledleleeL....rvkpgEalaVnlvlqlhrll............................. 214
                                   + A++l++ f f+     rle+l++++L    ++++g a   +++lq+hrll                             
  Zpz_sc04432.1.g00030.1.am.mk 294 DAAASLNMAFTFHG-FLGRLETLDFDKLhdvlDIRSGYARCFSCALQMHRLLavddaaavnvgtstqaswpsgasrfvrfa 373
                                   5799**********.689999999999866668999********************************************* PP

                          GRAS 215 .............................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
                                                                + +  ++   +++ ++v+ +sPkv+vvveqea+hn+++F+ rf ea+ yy+a
  Zpz_sc04432.1.g00030.1.am.mk 374 ggqemnksnvhpdpspttplclvaptptpSPPSRVPPLLTRFQHAVRAVSPKVLVVVEQEANHNEPEFAVRFQEAFGYYAA 454
                                   *************************9987555555557889**************************************** PP

                          GRAS 267 lfdsl.eaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                                   lfd+l +   p+ +  eer+ vE++llg+ei++v+  eg errerhe l++W +r+  aGF+pvpls++a ++a+ +lrk 
  Zpz_sc04432.1.g00030.1.am.mk 455 LFDALqDRAGPEGQmhEERAQVEQVLLGEEIKDVLVREGVERRERHEPLHRWAARMAPAGFGPVPLSYEAKNEADEVLRKL 535
                                   *****65555655588***************************************************************** PP

                          GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                   + ++y+  e+ ++l+l+ ++rpL++vSaWr
  Zpz_sc04432.1.g00030.1.am.mk 536 ALREYENREHGNCLLLCRSERPLYAVSAWR 565
                                   *999*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098539.17551545IPR005202Transcription factor GRAS
PfamPF035143.8E-3680293IPR005202Transcription factor GRAS
PfamPF035141.4E-48294565IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    Send to blast
MASDLPITVS ALHHTLKFIQ NYPEYFRILE AFLNQHPLLV AGRKKKMMDH PTSNARQQPP  60
QEPEDEEGRL AASLVHLPLA LWECAAHVAA GRFDGASRCL ERVLGLAAIG DGPMPRLARI  120
LADALARCLL LRLGPVNRAL IQPSAYLDQR SVRAARYGFV KLLPFLRVAY VAINRAILDA  180
TDKEKYVHVI DLSGPAANPW QWLKLMRAMH RRPGGAPNLH ITVVHDERVF LADMWARLRM  240
EAESLNMAFT FHGFLGRLET LDFDKLHDVL DIRSGYARCF SCALQMHRLL AVDDAAASLN  300
MAFTFHGFLG RLETLDFDKL HDVLDIRSGY ARCFSCALQM HRLLAVDDAA AVNVGTSTQA  360
SWPSGASRFV RFAGGQEMNK SNVHPDPSPT TPLCLVAPTP TPSPPSRVPP LLTRFQHAVR  420
AVSPKVLVVV EQEANHNEPE FAVRFQEAFG YYAALFDALQ DRAGPEGQMH EERAQVEQVL  480
LGEEIKDVLV REGVERRERH EPLHRWAARM APAGFGPVPL SYEAKNEADE VLRKLALREY  540
ENREHGNCLL LCRSERPLYA VSAWRPWTFE VLDSINMAVP LPAGQGPSTW TWPQQQQQAP  600
FHNLTG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A3e-13411565221375GRAS family transcription factor containing protein, expressed
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04432.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1D6QHE21e-138A0A1D6QHE2_MAIZE; Scarecrow-like protein 3
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60438176
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.14e-48scarecrow-like 3