PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04356.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 307aa    MW: 33517.3 Da    PI: 10.8319
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04356.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.36.2e-2782131251
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                   prlrWt eLH++Fv av++LGG++kAtPk il+lm+v gLt++h kSHLQ
  Zpz_sc04356.1.g00010.1.am.mk  82 PRLRWTAELHHSFVGAVDSLGGPDKATPKLILQLMDVRGLTIAHAKSHLQ 131
                                   8************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-2478131IPR009057Homeodomain-like
SuperFamilySSF466891.15E-1180131IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-1882131IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MQQCCAVASA GDSRRLCSYP FRLRFCCRCR CRAQGRLWGL NMKVESKEGE VDQGLPAERA  60
EGAMGGGQNG GVTRRYNRSK VPRLRWTAEL HHSFVGAVDS LGGPDKATPK LILQLMDVRG  120
LTIAHAKSHL QHGSDDCMQA MSMGRRRRMN QGLGLQRDAS TLQALGFWVR GSELFKVHQI  180
SRPVANHISP GVGQLPSKEI SFESRGFLFR HEQAVKRSQS LSTLGPEAVE ATTSWPSESS  240
VVLSPPSSTS FGGRSGASGC FFARQRVNLE FSLQAAMAKI TGCGRGSSTP KRAWPWKLCL  300
KQQAAPA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-1583131351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-1583131351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-1583131351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-1583131351Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04356.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022679157.14e-45uncharacterized protein LOC101762085 isoform X1
TrEMBLK3YZB75e-50K3YZB7_SETIT; Uncharacterized protein
STRINGSi019625m8e-51(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29663583
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-23G2-like family protein