PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04332.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family C2H2
Protein Properties Length: 1783aa    MW: 191528 Da    PI: 8.7328
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04332.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.0016363380219
                                   EETTTTEEESSHHHHHHH CS
                       zf-C2H2   2 kCpdCgksFsrksnLkrH 19 
                                   +C++Cg+ F+++ +L  H
  Zpz_sc04332.1.g00010.1.am.mk 363 VCENCGEEFTSWKSLLDH 380
                                   6***************99 PP
2zf-C2H211.90.0006812341256123
                                    EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2    1 ykCpdCgksFsrksnLkrHirtH 23  
                                    y+Cp+C+++F++   L  H r+H
  Zpz_sc04332.1.g00010.1.am.mk 1234 YECPHCHRVFPSGQALGGHKRSH 1256
                                    99******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139126.9E-4225247IPR007087Zinc finger, C2H2
PROSITE profilePS501578.746225247IPR007087Zinc finger, C2H2
SMARTSM003553.5225247IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280227247IPR007087Zinc finger, C2H2
SMARTSM00355260362382IPR015880Zinc finger, C2H2-like
SuperFamilySSF576675.24E-7530553No hitNo description
PROSITE profilePS5015710.221531558IPR007087Zinc finger, C2H2
PfamPF139121.4E-8531555IPR007087Zinc finger, C2H2
SMARTSM003550.13531553IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280533553IPR007087Zinc finger, C2H2
SuperFamilySSF576675.24E-7635662No hitNo description
PfamPF139122.8E-12639663IPR007087Zinc finger, C2H2
PROSITE profilePS501578.995640662IPR007087Zinc finger, C2H2
SMARTSM003551.6640662IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280642662IPR007087Zinc finger, C2H2
SMARTSM003550.0819821004IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.7439821009IPR007087Zinc finger, C2H2
SuperFamilySSF576672.44E-69831004No hitNo description
PROSITE patternPS0002809841004IPR007087Zinc finger, C2H2
PfamPF139121.8E-711691193IPR007087Zinc finger, C2H2
SMARTSM0035511011691189IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.44E-612291256No hitNo description
PROSITE profilePS5015710.11812341256IPR007087Zinc finger, C2H2
PfamPF139125.2E-1212341256IPR007087Zinc finger, C2H2
SMARTSM003550.007712341256IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028012361256IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1783 aa     Download sequence    Send to blast
EIGAESSLAP VVGSRLAGSR LPPSRAGTRL YAHVPYDSRL TVCLSKFCPE NNGDSTRANY  60
IMEAGNEMEG AVDISERKRR NGSFETPWGT RDLSALSASP NLRKVGFEAG LLNVSISVLN  120
LLDWGEADRE EADIPNSNHT YVDSKLMAVA EASACKGQFR KTIGAAFLLP GSWTPCMPLP  180
EICRDRSIMA IAMENQTPVV QMPLVPASPL PPPPPPPPLP QAYKHHCKVC KKGFVCGRAL  240
GGHMRAHGVA DDVLSADDDD EEDNVFDDDG AGSFVGDSSS EQASPSATTK LPRXXXGHMR  300
AHGVADDVLS ADDDDEEDNV FDDDGAGSFV GDSSSEQASP SATTSKRMYT LRANPGRLKS  360
CRVCENCGEE FTSWKSLLDH GRCNNYEDGD GGTDGSTRRS PPLLDEEEVV EEDMALATAG  420
WSKGKRTRRT KMMVVGNGSV TEMTRLRATS PSSEEEDLAN CLVMLSSSRS AQPPPAVSDA  480
DQESCASASK DVVDRNRLLV PQPISMMAPA VPQLKLVAPP QPASTVPRGL FECKACKKVF  540
TSHQALGGHR ASHKKVKGCF AAKLESDRRE RPQPVTATPR ENIKVVDAKT SSVHAANADG  600
NTSTSGVVTA TAAPETAVTQ ANEAPSMSAA SPAKKKGKVH ECSICHRVFM SGQALGGHKR  660
CHWLTTGSGD PMTGAVSKFH PIVAQDHVMH DVCQQLTLGL PIFSAAHPIL DLNNVPTNPS  720
AAMKQAAELN DSVLCLNAPA SLYMPSWTAV HSNGINVNKA ATSSRNVDAA GAAATEDEAD  780
SRNAKKRKIS DLKDMNMAGE TSPWLQVGIG LRQPHHRDCL TVAGSLLHCS PFRGRTHARS  840
TPRLRLACKP GSWQGYLVTL TQPSNDLTEG SATFRNCMDR LITDHTERSM LVYTDTPFLP  900
YSALQVVDDD VSVHNCDAKP RPQWQAPRRP GPAMEGTSRW WRWLLPLSLA LAPPFSLLTI  960
FAPAESSARA PRAPSTLAMT KNTCKLCFRR FASPRAMAGH MRSHSVAAPA ASAAAVAAAT  1020
AAAARQPISS ASSASISFTT ADEDVGFRKP SSTYKLRENP KRSLRGAVRS SSDRESEAES  1080
TPPRAKRASP RAARGEQEPL SSLSEADTPE EDVALSLMKL SRDSWPSAAP METDCSDDES  1140
DDGYAPPTPP SPPRRPAPAP PVAEKRMQFQ CVACKKVFRS YQALGGHRAS NVRGGRGGCC  1200
APPVNAPPLP QPHAPSPLPE QHGEEGVDAK QQPYECPHCH RVFPSGQALG GHKRSHVCGA  1260
AAAAAEQAVP ASTPPSPIKN PGMIDLNVEP PSEEVELSAV SDPHFNTVSP KPSPATMSSS  1320
SSTAAATPVL FCFVSPLAFP LFACAPRRQQ QPAAPACAAP STAAMSSVSC RDPACLLGIL  1380
ACFLLFAASG HHMLYVDQTG IRCASTVSSI RVRLRRVPRR RNIGRHSSRR ETARGPPTIF  1440
RAGAWSPLGP APASTWRASR AFYLSEAGPG ASWTCSGLSG SYAEVLFYPP HQSPWLPYPR  1500
KPARRAARGG SRGRNGWRTR VRAWSVHMTG GSVRRQVGRT RRGGDGGESE GWRVTWSPDP  1560
DWTGDTQLGI RAPFPVSRPV AVVERRSSRR SGRYASPAQP VTNLRSFLFP IGSNQRRSAG  1620
TEQVPCFDLV ASSRSHESRG IMPSCVRARG PIEIGVASFR RVREQESTGL YTVAAPSPWP  1680
CARPHTWLVA SLANRPSREG VRAALQTLAT TLLLDVSLHF GHHWNGWPAN LLSRWSTRTA  1740
GGNTRHFYQA AQSPAGRPHW KCAYPYSTST SMLHFACLGR TCW
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04332.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35243262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.14e-22C2H2-like zinc finger protein