PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03857.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 282aa    MW: 31515.4 Da    PI: 6.4265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03857.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.82.3e-1591494128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 
                                    f F P+   l+++yL+kkv++ +    l  ++ +++ d++++ P  L +          + +++ ++ yfF+k++   ++
  Zpz_sc03857.1.g00050.1.am.mk   9 SFSFCPSKALLINHYLHKKVDSADvfsdLANATYFHDEDVCSARPDVLVRahtmparvpsREAGDGQRFYFFTKARFIGNK 89 
                                   589********************98865333356**************744667776653222244466777777654444 PP

                           NAM  71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                       +r+ + t  + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zpz_sc03857.1.g00050.1.am.mk  90 lnmRSRTIKNTGnKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 149
                                   1013344443323778*********965...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.2536165IPR003441NAC domain
SuperFamilySSF1019413.01E-218165IPR003441NAC domain
PfamPF023651.3E-1110148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MEMAAMDDSF SFCPSKALLI NHYLHKKVDS ADVFSDLANA TYFHDEDVCS ARPDVLVRAH  60
TMPARVPSRE AGDGQRFYFF TKARFIGNKL NMRSRTIKNT GNKETWHAEG SAKPVDGTAD  120
GYMTKLSYHV KTGPKTVEKP GWIMTEYSFK DTKEGDLVLC KIYISPRGPG RSKAPSLPAM  180
SDRKRKVADD LEEATPSTRP RQIDEDHQHA AVLEFGAERS QLTQDMPANS NSNSALEDID  240
WSWFMPESEA ERSQPHLAKP ASSGSNVTLE DIKLWANLLL AD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03857.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.14e-08NAC domain containing protein 73