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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc03767.1.g00040.1.am.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 355aa MW: 38768.9 Da PI: 5.2294 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc03767.1.g00040.1.am.mkhc | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 45 | 92 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W+ eEd llv++++++G g+W++ ar g++Rt+k+c++rw++yl
Zpz_sc03767.1.g00040.1.am.mkhc 45 RGPWSLEEDVLLVNYIAKHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 92
89********************************************97 PP
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2 | Myb_DNA-binding | 53.8 | 4.4e-17 | 98 | 141 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
Zpz_sc03767.1.g00040.1.am.mkhc 98 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 141
7999******************.*********.***********96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0016036 | Biological Process | cellular response to phosphate starvation |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MDVAAVTGMV GNFDDDQLEE AMGMSLAGSA AVSAVGSEDE ADLRRGPWSL EEDVLLVNYI 60 AKHGEGRWNS LARSAGLKRT GKSCRLRWLN YLRPDVRRGN ITPEEQLLIL ELHSRWGNRW 120 SKIAQHLPGR TDNEIKNYWR TRVQKHAKQL RCEVNSRQFR DVVRFVWMPR LVERIQAEAA 180 AGGAHDAAAM AVGVLAPATT VSAPAACQMS ASAYSRQSGA PLNEQAAHQC RHHEHTDYYY 240 NESAGQTAAA MSPDDTSSAL RSTITAEASH AQHQLASTTT TPTNEGGGVM QCGGAATDDV 300 VVQEDVFGFG GSWSDLLATT GCGESMISLP DFELGDFEDN VWSQEDLGLH QQHWS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK120551 | 1e-131 | AK120551.1 Oryza sativa Japonica Group cDNA clone:J013130B13, full insert sequence. |
GenBank | CT830663 | 1e-131 | CT830663.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128H09, full insert sequence. |