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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc03609.1.g00010.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 413aa MW: 44772.3 Da PI: 4.317 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc03609.1.g00010.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 54 | 103 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g
Zpz_sc03609.1.g00010.1.am.mk 54 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 103
789******.7*********33....35**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MALKRKASPG MTDDLPCEDL RSPPLAAVAS AAEPRESWAD AVGAVAAAQR ARKRFVGVRQ 60 RPSGRWVAEI KDTIQKIRVW LGTFDTAEEA ARAYDEAACL LRGSNTRTNF WPRPAGTAAA 120 AMAARQHDSV PPTTALPSKV TNLLLLRLKK ARSGHGFGDY LDVSATTEQS LMQQQQQLRQ 180 DDGLAEDHCN FQVDDFLSFD STGDESGIVR HEDESNCSQE ADDGGEEVVM EEEEEAPLDL 240 RFMDANPCPP AEIITPFEMV ASELGGVEAE PDADGGYGTA DAEPSTTAIH EVLKRMKYER 300 KISASLYALS GVSECLRMHL IDADDLSGDA ASRRHELAFS GLREACRKKQ HEQQQEADEE 360 GGDVGREEER ESSTSSNISS LSSSPEAAST SPEANAVDSD VLLWSSLDLP SIC
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012620 | 1e-73 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |