|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zpz_sc03531.1.g00030.1.am.mk |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
ERF |
Protein Properties |
Length: 468aa MW: 49913.9 Da PI: 6.9339 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc03531.1.g00030.1.am.mk | genome | ZGD | View Nucleic Acid |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 182 | 230 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f+t+e+Aa+a++ a+++++g
Zpz_sc03531.1.g00030.1.am.mk 182 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFDTPEMAARAHDVAALAIKG 230
9****998.**********843...6***********************9987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MLVVKVWIHY DPDAATDTST HMLQQYVDVA YIRARAHNHH PNGGVRVDQW SRCASVSFAT 60 ANRGALIVSC GRAFRPLPAL RRSVTWATRS PVEPVHGEGG NNRSIELTFL LRAIGATQLT 120 AACPVMGEER AMSPVSGASA TCSHHGGFSS SSSGPGSPLA SPESGAASSR KRPRRELKHP 180 AYRGVRMRAW GKWVSEIREP RKKSRIWLGT FDTPEMAARA HDVAALAIKG RAAHLNFPEM 240 SHELPRAASS APEDVRAAAA LAAAMQSAAP AASSDSSRGS AGCVEDDEAT QSRTAADASI 300 DSTHSACNDE NEEATPAAPS SSSDGGCNND DEEATQLDSH VMDLALFELP DVLREFGLAL 360 PPLTPCCDDF CWDEPLLLWQ HCGAGAEAKF AVAPALWYCL DWWSFGNGGQ GKVGRGGEGR 420 KKVQFGAAVE CTTESGVPVV ARPAKIARDR PSLADRQHMG VRSTTILT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KJ728262 | 1e-114 | KJ728262.1 Zea mays clone pUT6539 AP2-EREBP transcription factor (EREB176) gene, partial cds. |